oncominer utep.edu

OncoMiner Pipeline Submit Server

Welcome to the OncoMiner Pipeline. To submit a nucleotide variant file to the pipeline for processing. This server allows you two upload two kinds of files. Nucleotide variant files in the format described below, typical of Otogenetics exome-sequencing results, which will be processed by the pipeline to provide PROVEAN scores and PubMed cross-references. A submitted job will produce four output files. Jobname.annotated.csv this file is in the same format as the jobname.PROVEAN.csv file.Jobname.P.
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Bioinformatics at UTEP Home

Welcome to Bioinformatics at UTEP! We offer exciting opportunities in research, teaching, and professional development to meet the challenges in many fast growing industries in diverse areas of genomic and pharmaceutical research. Bioinformatics is an interdisciplinary science with a focus on data management and interpretation for complex biological phenomena that are analyzed and visualized using mathematical modeling and numerical methodologies with predictive algorithms.

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OncoMiner Pipeline Submit Server

DESCRIPTION

Welcome to the OncoMiner Pipeline. To submit a nucleotide variant file to the pipeline for processing. This server allows you two upload two kinds of files. Nucleotide variant files in the format described below, typical of Otogenetics exome-sequencing results, which will be processed by the pipeline to provide PROVEAN scores and PubMed cross-references. A submitted job will produce four output files. Jobname.annotated.csv this file is in the same format as the jobname.PROVEAN.csv file.Jobname.P.

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This web site oncominer.utep.edu has the following in the web page, "To submit a nucleotide variant file to the pipeline for processing." We noticed that the webpage also stated " This server allows you two upload two kinds of files." It also said " Nucleotide variant files in the format described below, typical of Otogenetics exome-sequencing results, which will be processed by the pipeline to provide PROVEAN scores and PubMed cross-references. A submitted job will produce four output files. csv this file is in the same format as the jobname."

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